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encyclopedia of Rare Disease Annotation for Precision Medicine



   simpson dysmorphia syndrome
  

Disease ID 1341
Disease simpson dysmorphia syndrome
Definition
A rare, X-linked inherited syndrome caused by mutations in the GPC3 and GPC4 genes. It is characterized by pre-and postnatal overgrowth, coarse facial features, macrocephaly, macroglossia, congenital heart defects, and intellectual disability.
Synonym
bulldog syndrome
dgsx
dysplasia gigantism syndrome, x-linked
golabi-rosen syndrome
mental retardation-overgrowth syndrome
sdys
sgbs
sgbs1
simpson dysplasia syndrome
simpson golabi behmel syndrome
simpson golabi behmel syndrome type 1
simpson syndrome
simpson-golabi-behmel syndrome
simpson-golabi-behmel syndrome (disorder)
simpson-golabi-behmel syndrome, type 1
Orphanet
OMIM
DOID
UMLS
C0796154
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:2)
C0010308  |  congenital hypothyroidism  |  1
C0008925  |  cleft palate  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:4)
8481  |  OFD1  |  UNIPROT
54884  |  RETSAT  |  CTD_human
2719  |  GPC3  |  CLINVAR;CTD_human;GHR;UNIPROT;ORPHANET
2239  |  GPC4  |  ORPHANET;UNIPROT
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:46)
9370  |  ADIPOQ  |  2.669  |  DISEASES
2334  |  AFF2  |  1.424  |  DISEASES
10533  |  ATG7  |  1.089  |  DISEASES
25805  |  BAMBI  |  3.037  |  DISEASES
960  |  CD44  |  2.966  |  DISEASES
1028  |  CDKN1C  |  1.87  |  DISEASES
1052  |  CEBPD  |  1.389  |  DISEASES
1675  |  CFD  |  1.406  |  DISEASES
56265  |  CPXM1  |  3.966  |  DISEASES
1499  |  CTNNB1  |  1.141  |  DISEASES
1741  |  DLG3  |  1.997  |  DISEASES
1961  |  EGR4  |  2.568  |  DISEASES
83401  |  ELOVL3  |  3.146  |  DISEASES
2246  |  FGF1  |  2.761  |  DISEASES
2254  |  FGF9  |  1.713  |  DISEASES
252995  |  FNDC5  |  1.207  |  DISEASES
50486  |  G0S2  |  2.29  |  DISEASES
2696  |  GIPR  |  1.655  |  DISEASES
2719  |  GPC3  |  6.988  |  DISEASES
2239  |  GPC4  |  5.626  |  DISEASES
2262  |  GPC5  |  3.672  |  DISEASES
10082  |  GPC6  |  4.789  |  DISEASES
3481  |  IGF2  |  3.039  |  DISEASES
3482  |  IGF2R  |  2.134  |  DISEASES
3654  |  IRAK1  |  1.161  |  DISEASES
9682  |  KDM4A  |  1.489  |  DISEASES
64900  |  LPIN3  |  2.838  |  DISEASES
5599  |  MAPK8  |  1.016  |  DISEASES
28985  |  MCTS1  |  3.447  |  DISEASES
8076  |  MFAP5  |  2.754  |  DISEASES
4881  |  NPR1  |  1.704  |  DISEASES
64324  |  NSD1  |  2.423  |  DISEASES
8481  |  OFD1  |  2.503  |  DISEASES
23762  |  OSBP2  |  2.257  |  DISEASES
5214  |  PFKP  |  2.159  |  DISEASES
5733  |  PTGER3  |  1.362  |  DISEASES
5764  |  PTN  |  1.175  |  DISEASES
292  |  SLC25A5  |  2.176  |  DISEASES
293  |  SLC25A6  |  2.264  |  DISEASES
6517  |  SLC2A4  |  2.075  |  DISEASES
6590  |  SLPI  |  1.242  |  DISEASES
81609  |  SNX27  |  2.811  |  DISEASES
6899  |  TBX1  |  1.907  |  DISEASES
6925  |  TCF4  |  1.276  |  DISEASES
8740  |  TNFSF14  |  2.064  |  DISEASES
80146  |  UXS1  |  3.757  |  DISEASES
Locus(Waiting for update.)
Disease ID 1341
Disease simpson dysmorphia syndrome
Integrated Phenotype
HPO | Name(Total Integrated Phenotypes:1)
HP:0008523  |  Ear, posterior helical notch
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:4)
HP:0002015  |  Swallowing difficulty  |  1
HP:0000175  |  Palatoschisis  |  1
HP:0001548  |  Overgrowth  |  1
HP:0000851  |  Congenital hypothyroidism  |  1
Disease ID 1341
Disease simpson dysmorphia syndrome
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Manually Genotypes:1)
Gene Mutation DOI Article Title
GPC3-doi:10.1038/gim.2015.51Clinical performance of the CytoScan Dx Assay in diagnosing developmental delay/intellectual disability
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:4)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs104894854NA2719GPC3umls:C0796154CLINVARNA0.570043349NAGPC3X133753628AT
rs104894855NA2719GPC3umls:C0796154CLINVARNA0.570043349NAGPC3X133753919GA
rs122453121NA2719GPC3umls:C0796154CLINVARNA0.570043349NAGPC3X133699902GA
rs267606850NA2719GPC3umls:C0796154CLINVARNA0.570043349NAGPC3X133536201CT
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 1341
Disease simpson dysmorphia syndrome
Case(Waiting for update.)